Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs60512607 chr6:26054171 T/A 4.4E-9 522 41.27 36.4 3.37 KM Plot
KIRC rs60608799 chr6:2455730 AAAG/A 3.33E-6 514 40.8 37.02 11.25 KM Plot
KIRC rs60896094 chr11:34806561 A/G 1.49E-7 522 40 38.47 3.3 KM Plot
KIRC rs609200 chr11:125383808 G/A 7.64E-6 515 39.38 41.73 1.43 KM Plot
KIRC rs61236902 chr6:50813055 C/G 4.69E-6 520 40.5 40.6 15.3 KM Plot
KIRC rs62156693 chr2:67639583 A/G 2.88E-7 524 39.47 38.65 2.03 KM Plot
KIRC rs62158280 chr2:67535694 C/G 1.8E-7 526 40.28 37.7 2.03 KM Plot
KIRC rs62158281 chr2:67537175 T/A 1.8E-7 526 40.28 37.7 2.03 KM Plot
KIRC rs62158289 chr2:67562021 T/C 3.77E-7 522 39.23 37.73 2.03 KM Plot
KIRC rs62330971 chr4:177529529 G/A 0 521 43.43 28.98 0.6 KM Plot
KIRC rs62391186 chr6:2407351 G/A 5.56E-8 526 40 40.57 12.25 KM Plot
KIRC rs62394512 chr6:25946627 A/G 5.27E-5 523 42.4 30.52 6.8 KM Plot
KIRC rs62399529 chr6:20280879 T/A 1.3E-8 518 9.02 36.1 43.68 KM Plot
KIRC rs62432579 chr7:7721540 A/T 5.85E-5 526 38.1 48.48 5.47 KM Plot
KIRC rs62432580 chr7:7721646 A/C 5.85E-5 526 38.1 48.48 5.47 KM Plot